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List of biology softwares for FreeBSD

Software / port Version Description
py-biopython
1.54
A collection of Python modules for bioinformatics
p5-Bio-Das
1.17
Client-side library for Distributed Genome Annotation System
p5-Bio-Graphics
2.11
Generate GD Images of Bio::Seq Objects
p5-Bio-Das-Lite
2.04
Perl extension for the DAS (HTTP+XML) Protocol
p5-Bio-MAGETAB
1.10
A data model and utility API for the MAGE-TAB format
ruby-bio
1.4.0
Integrated environment for Bioinformatics written in Ruby
migrate
3.1.6
A program to estimate population sizes and migration rates
libsbml
4.0.1
An API Library for Working with SBML File
pycogent
1.4.1
A toolkit for statistical analysis of biological sequences
iolib
1.12.2
A general purpose trace file(and Experiment File) reading interface
blast
2.0
WU BLAST, a software package for sequence similarity searches
L-Breeder
1.0
Allows you to display and breed L-system forms
recombine
1.41
A program to fit population models across sites
phylip
3.69
A Phylogeny Inference Package
p5-AcePerl
1.92
Perl5 interface to the ACEDB genome database system
libgenome
0.5.2
Toolkit for developing bioinformatic related software in C++
gff2ps
0.98d
Converts gff-formated genomic data-sets to PostScript
phrap
0.990329
Phrap is a program for assembling shotgun DNA sequence data
emboss
6.2.0
A collection of open source tools for genetic sequence analysis
blat
34
A fast tool for local sequence similarity searches

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