Fluctuate

A program to fit population models

Fluctuate fits the model which has a single population which has been growing
(or shrinking) according to an exponential growth law. It estimates 4Nu and
g, where N is the effective population size, u is the neutral mutation rate
per site, and g is the growth rate of the population.

Fluctuate forms part of the Lamarc (Likelihood Analysis with Metropolis
Algorithm using Random Coalescence) suite. See:

http://evolution.genetics.washington.edu/lamarc.html

http://evolution.genetics.washington.edu/lamarc/fluctuate.html

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