FreeBSD biology  : recombine
A program to fit population models across sites
Recombine fits a model which has a single population of constant size with a
single recombination rate across all sites. It can accomodate either plain
DNA or RNA data or SNP (single nucleotide polymorphism) data.
Recombine forms part of the Lamarc (Likelihood Analysis with Metropolis
Algorithm using Random Coalescence) suite. See:
http://evolution.genetics.washington.edu/lamarc.html
http://evolution.genetics.washington.edu/lamarc/recombine.html
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recombine history
v. 1.5
date: 2007/01/25 12:22:50; author: vd; state: Exp; lines: +8 -10
Fix master sites, un-deprecate and update biology/recombine to 1.41.
v. 1.4
date: 2006/12/10 12:36:15; author: gabor; state: Exp; lines: +3 -0
- Deprecate
- Set EXPIRATION_DATE
Approved by: erwin (mentor)
v. 1.3
date: 2004/11/20 08:09:45; author: linimon; state: Exp; lines: +1 -1
With portmgr hat on, reset inactive maintainer. These ports are now up
for adoption.
v. 1.2
date: 2003/03/07 05:56:43; author: ade; state: Exp; lines: +1 -0
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.
E Nomini Patri, E Fili, E Spiritu Sancti.
v. 1.1
date: 2001/08/06 14:49:51; author: wjv; state: Exp;
Add recombine 1.40, a program to fit population models across sites.
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