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FreeBSD biology : recombine

A program to fit population models across sites

 Recombine fits a model which has a single population of constant size with a
single recombination rate across all sites.  It can accomodate either plain
DNA or RNA data or SNP (single nucleotide polymorphism) data.

Recombine forms part of the Lamarc (Likelihood Analysis with Metropolis
Algorithm using Random Coalescence) suite.  See:

  http://evolution.genetics.washington.edu/lamarc.html 

http://evolution.genetics.washington.edu/lamarc/recombine.html



recombine history


v. 1.5
date: 2007/01/25 12:22:50;  author: vd;  state: Exp;  lines: +8 -10
Fix master sites, un-deprecate and update biology/recombine to 1.41.

v. 1.4 date: 2006/12/10 12:36:15; author: gabor; state: Exp; lines: +3 -0 - Deprecate - Set EXPIRATION_DATE Approved by: erwin (mentor)
v. 1.3 date: 2004/11/20 08:09:45; author: linimon; state: Exp; lines: +1 -1 With portmgr hat on, reset inactive maintainer. These ports are now up for adoption.
v. 1.2 date: 2003/03/07 05:56:43; author: ade; state: Exp; lines: +1 -0 Clear moonlight beckons. Requiem mors pacem pkg-comment, And be calm ports tree. E Nomini Patri, E Fili, E Spiritu Sancti.
v. 1.1 date: 2001/08/06 14:49:51; author: wjv; state: Exp; Add recombine 1.40, a program to fit population models across sites. =============================================================================



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