The FreeBSD Ports Archive

FreeBSD biology : avida

Avida is an auto-adaptive genetic system designed for ALife research

 The computer program avida is an auto-adaptive genetic system designed
primarily for use as a platform in Digital or Artificial Life research. The
avida system is based on concepts similar to those employed by the tierra
program developed by Tom Ray. It is a population of self-reproducing strings
with a Turing-complete genetic basis subjected to Poisson-random mutations.
The population adapts to the combination of an intrinsic fitness landscape
(self-reproduction) and an externally imposed (extrinsic) fitness function
provided by the researcher. By studying this system, one can examine
evolutionary adaptation, general traits of living systems (such as
self-organization), and other issues pertaining to theoretical or
evolutionary biology and dynamic systems. 

avida history

v. 1.22
date: 2007/05/02 07:13:53;  author: edwin;  state: Exp;  lines: +1 -7
[patch] cleanup non-supported FreeBSD versions

PR:		ports/111724
Submitted by:	Edwin Groothuis 
Approved by:	maintainer timeout

v. 1.21
date: 2006/08/10 23:02:49;  author: edwin;  state: Exp;  lines: +7 -1
Mark as broken for i386 4.x

PR:		ports/101789
Submitted by:	Scott Flatman 

v. 1.20
date: 2006/07/08 03:36:36;  author: rafan;  state: Exp;  lines: +32 -35
- Update to 2.4.3
- Pass maintainersip to submitter

PR:		99901
Submitted by:	Scott Flatman 
Approved by:	delphij (mentor, implicit)

v. 1.19
date: 2006/05/03 23:26:32;  author: edwin;  state: Exp;  lines: +0 -1
Remove USE_REINPLACE from all categories starting with B

v. 1.18
date: 2005/04/12 03:24:56;  author: obrien;  state: Exp;  lines: +1 -1
At Kris's request, back out the MACHINE_ARCH spelling correction until
after 5.4-RELEASE.

v. 1.17
date: 2005/04/11 08:01:30;  author: obrien;  state: Exp;  lines: +1 -1
Assist getting more ports working on AMD64 by obeying the
Ports Collection documentation and use 'ARCH' rather than 'MACHINE_ARCH'.

v. 1.16
date: 2004/09/23 07:10:32;  author: danfe;  state: Exp;  lines: +1 -7
The build should be fixed now, so remove BROKEN mark.

Approved by:	portmgr (marcus), fjoe (mentor, implicit)

v. 1.15
date: 2004/09/17 22:47:50;  author: kris;  state: Exp;  lines: +7 -1
BROKEN on 5.x: Does not compile

Approved by:    portmgr (self)

v. 1.14
date: 2004/05/21 13:24:56;  author: thierry;  state: Exp;  lines: +0 -2
Add forgotten patches...

v. 1.13
date: 2004/05/21 05:29:38;  author: kris;  state: Exp;  lines: +2 -0
BROKEN: Broken pkg-plist

v. 1.12
date: 2004/05/11 05:40:32;  author: thierry;  state: Exp;  lines: +1 -0
Add a missing BUILD_DEPENDS.

Reported by:	Kris.

v. 1.11
date: 2004/05/10 19:26:42;  author: thierry;  state: Exp;  lines: +36 -28
Upgrade to 2.0b7 and unbreak.

v. 1.10
date: 2004/05/09 11:04:04;  author: markus;  state: Exp;  lines: +1 -1
Fix MASTER_SITES

v. 1.9
date: 2004/04/10 17:26:29;  author: trevor;  state: Exp;  lines: +1 -1
Tidy up whitespace.

v. 1.8
date: 2004/03/07 00:18:27;  author: linimon;  state: Exp;  lines: +1 -1
Maintainer reports being unable to look after this port any longer.
Thanks for your efforts in the past.

v. 1.7
date: 2004/02/04 05:18:49;  author: marcus;  state: Exp;  lines: +1 -0
Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.

(Part 2)

v. 1.6
date: 2003/06/04 22:43:21;  author: kris;  state: Exp;  lines: +5 -5
Move inclusion of bsd.port.pre.mk later in the file for conditional BROKEN
tag.  Early inclusion caused problems for some ports, so to be safe I'm
updating all of them.

Pointy hat to:	kris

v. 1.5
date: 2003/05/18 09:28:02;  author: kris;  state: Exp;  lines: +7 -1
BROKEN on 5.1: bad C++

v. 1.4
date: 2003/02/21 11:01:31;  author: knu;  state: Exp;  lines: +1 -0
De-pkg-comment.

v. 1.3
date: 2002/11/03 23:40:02;  author: edwin;  state: Exp;  lines: +0 -2
Make biology/avida building on -current again

PR:		ports/44819
Submitted by:	Oliver Lehmann 
Approved by:	Jeremy Karlson 

v. 1.2
date: 2002/09/19 02:45:38;  author: kris;  state: Exp;  lines: +2 -0
BROKEN: Does not build

v. 1.1
date: 2002/04/20 15:17:45;  author: ijliao;  state: Exp;
add avida 1.6.0
Avida is an auto-adaptive genetic system designed for ALife research

PR:		37268
Submitted by:	Jeremy Karlson 
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