tabixpp

1.1.2

C++ wrapper to tabix indexer

This is a C++ wrapper around tabix project which abstracts some of the details of opening and jumping in tabix-indexed files. Tabix is a generic indexer for TAB-delimited genome position files.

Origin: biology/tabixpp

Category: biology

Size: 64.3KiB

License: MIT

Maintainer: jwb@FreeBSD.org

Dependencies: 1 packages

Required by: 0 packages

Website: github.com/vcflib/tabixpp

$pkg install tabixpp

Dependencies (1)

htslib

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htslib1.22

C library for high-throughput sequencing data formats

p5-BioPerl1.007008

Collection of Perl modules for bioinformatics

samtools1.22

Tools for manipulating next-generation sequencing data

biolibc0.2.7

Low-level high-performance bioinformatics library

bcftools1.22

Tools for manipulating next-generation sequencing data

bedtools2.31.1

Toolset for genome set arithmetic such as intersect, union

fastqc0.12.1

Quality control tool for high throughput sequence data

sra-tools3.3.0_2

NCBI's toolkit for handling data in INSDC Sequence Read Archives

bwa0.7.19

Burrows-Wheeler sequence aligner

libsbml5.20.5_1

API Library for Working with SBML File