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Seaview
Jul 20, 2023
Multiple DNA/protein sequence alignment editor
SeaView is a multiple sequence alignment editor.
You can align DNA/protein sequences from several organisms, and find out their relative postions in phylogenic tree.
Once SeaView is installed, you can open the on-line help window through the ‘Help’ button to learn how to use SeaView.
Example mase files can be found at
ftp//pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/
Checkout these related ports:
- Wise - Intelligent algorithms for DNA searches
- Wfa2-lib - Exact gap-affine algorithm using homology to accelerate alignment
- Vt - Discovers short variants from Next Generation Sequencing data
- Vsearch - Versatile open-source tool for metagenomics
- Viennarna - Alignment tools for the structural analysis of RNA
- Velvet - Sequence assembler for very short reads
- Vcftools - Tools for working with VCF genomics files
- Vcflib - C++ library and CLI tools for parsing and manipulating VCF files
- Vcf2hap - Generate .hap file from VCF for haplohseq
- Vcf-split - Split a multi-sample VCF into single-sample VCFs
- Unikmer - Toolkit for nucleic acid k-mer analysis, set operations on k-mers
- Unanimity - Pacific Biosciences consensus library and applications
- Ugene - Integrated bioinformatics toolkit
- Ucsc-userapps - Command line tools from the UCSC Genome Browser project
- Trimmomatic - Flexible read trimming tool for Illumina NGS data