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pbbam

0.18.0_13

PacBio BAM C++ library, with SWIG bindings

As of the 3.0 release of SMRTanalysis, PacBio is embracing the industry standard BAM format for (both aligned and unaligned) basecall data files. We have also formulated a BAM companion file format (bam.pbi) enabling fast access to a richer set of per-read information as well as compatibility for software built around the legacy cmp.h5 format. The pbbam software package provides components to create, query, & edit PacBio BAM files and associated indices. These components include a core C++ library, bindings for additional languages, and command-line utilities.

Origin: biology/pbbam
Category: biology
Size: 2.70MiB
License: BSD3CLAUSE
Maintainer: ports@FreeBSD.org
Dependencies: 3 packages
Required by: 0 packages
Website: github.com/PacificBiosciences/pbbam
$pkg install pbbam

Dependencies (3)

python311htslibboost-libs

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