May 26, 2018
Program to fit population models
Fluctuate fits the model which has a single population which has been growing or shrinking according to an exponential growth law. It estimates 4Nu and g, where N is the effective population size, u is the neutral mutation rate per site, and g is the growth rate of the population.
Fluctuate forms part of the Lamarc Likelihood Analysis with Metropolis Algorithm using Random Coalescence suite. See