bifrost

1.3.5_1

Parallel construction, indexing and querying of de Bruijn graphs

Bifrost is a tool and API for parallel construction, indexing and querying of colored and compacted de Bruijn graphs from FASTA/FASTQ DNA/RNA sequence files.

Origin: biology/bifrost

Category: biology

Size: 6.07MiB

License: BSD2CLAUSE

Maintainer: jwb@FreeBSD.org

Dependencies: 0 packages

Required by: 0 packages

Website: github.com/pmelsted/bifrost

$pkg install bifrost

More in biology

htslib1.22

C library for high-throughput sequencing data formats

p5-BioPerl1.007008

Collection of Perl modules for bioinformatics

samtools1.22

Tools for manipulating next-generation sequencing data

biolibc0.2.7

Low-level high-performance bioinformatics library

bcftools1.22

Tools for manipulating next-generation sequencing data

bedtools2.31.1

Toolset for genome set arithmetic such as intersect, union

fastqc0.12.1

Quality control tool for high throughput sequence data

sra-tools3.3.0_2

NCBI's toolkit for handling data in INSDC Sequence Read Archives

bwa0.7.19

Burrows-Wheeler sequence aligner

libsbml5.20.5_1

API Library for Working with SBML File