The FreeBSD Ports Archive

FreeBSD biology : boinc-simap

Similarity Matrix of Proteins project for BOINC

 SIMAP (Similarity Matrix of Proteins) is a public database of pre-calculated
protein similarities that plays a key role in many bioinformatics methods. It
contains about all currently published protein sequences and is continuously
updated.

The computational effort for keeping SIMAP up-to-date is constantly increasing.
Please help to update SIMAP by calculating protein similarities on your
computer. 

boinc-simap history

v. 1.7
date: 2007/07/08 11:56:59;  author: pav;  state: Exp;  lines: +4 -0
- Runs on 7.0-CURRENT with compat6x

Reported by:	Rene Ladan 

v. 1.6
date: 2007/05/19 20:00:22;  author: flz;  state: Exp;  lines: +1 -0
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.

v. 1.5
date: 2006/10/10 11:31:41;  author: pav;  state: Exp;  lines: +13 -7
- Add hmmer 5.09 application

v. 1.4
date: 2006/07/17 21:44:52;  author: pav;  state: Exp;  lines: +2 -2
- Update to 5.10

v. 1.3
date: 2006/06/24 21:04:45;  author: pav;  state: Exp;  lines: +9 -1
- Provide SSE optimized application as an option

v. 1.2
date: 2006/06/22 18:53:30;  author: pav;  state: Exp;  lines: +9 -3
- Instruct amd64 users to libmap libpthread.so.2 to libc_r.so.6

v. 1.1
date: 2006/06/19 20:32:08;  author: pav;  state: Exp;
SIMAP (Similarity Matrix of Proteins) is a public database of pre-calculated
protein similarities that plays a key role in many bioinformatics methods. It
contains about all currently published protein sequences and is continuously
updated.

The computational effort for keeping SIMAP up-to-date is constantly increasing.
Please help to update SIMAP by calculating protein similarities on your
computer.

WWW: http://boinc.bio.wzw.tum.de/boincsimap/
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